Dr Bernadine Flanagan

Li, Anqi, Shewan, Heather M., Flanagan, Bernadine M., Williams, Barbara A., Mikkelsen, Deirdre and Gidley, Michael J. (2024). Impact of pectin and alginate gel particle size and concentration on in vitro gut fermentation. Food Hydrocolloids, 160 110808, 110808. doi: 10.1016/j.foodhyd.2024.110808

Yao, Hong, Flanagan, Bernadine M., Williams, Barbara A., Wu, Xiyang, Mikkelsen, Deirdre and Gidley, Michael J. (2024). Differential effects of pectin-based dietary fibre type and gut microbiota composition on in vitro fermentation outcomes. Carbohydrate Polymers, 339 122284, 122284. doi: 10.1016/j.carbpol.2024.122284

Bermudez, Cindy, Yao, Hong, Widaningrum, Williams, Barbara A., Flanagan, Bernadine M., Gidley, Michael J. and Mikkelsen, Deirdre (2024). Biomass attachment and microbiota shifts during porcine faecal in vitro fermentation of almond and macadamia nuts differing in particle sizes. Food and Function, 15 (5), 2406-2421. doi: 10.1039/d3fo03612j

Widaningrum, Flanagan, Bernadine M., Williams, Barbara A., Sonni, Francesca, Mikkelsen, Deirdre and Gidley, Michael J. (2024). In vitro fermentation characteristics of fruit and vegetable juicing wastes using human fecal inoculum are determined by cell wall architecture. Food Hydrocolloids, 146 (Part A) 109205, 109205. doi: 10.1016/j.foodhyd.2023.109205

Visnupriyan, R., Flanagan, B.M., Harper, K.J. and Cozzolino, D. (2024). Near infrared spectroscopy combined with chemometrics as tool to monitor starch hydrolysis. Carbohydrate Polymers, 324 121469, 121469. doi: 10.1016/j.carbpol.2023.121469

Jacob, Sera Susan, Flanagan, Bernadine M., Williams, Barbara A., Brown, Rayleen, Hickey, Sarah, Gidley, Michael J. and Smyth, Heather E. (2024). Bringing back a forgotten legume—sensory profiles of Australian native wattleseeds reveal potential for novel food applications. Journal of Food Science, 89 (1), 656-670. doi: 10.1111/1750-3841.16860

Xiong, Weiyan, Devkota, Lavaraj, Flanagan, Bernadine M., Gu, Zhipeng, Zhang, Bin and Dhital, Sushil (2023). Plant cell wall composition modulates the gut microbiota and metabolites in in-vitro fermentation. Carbohydrate Polymers, 316 121074, 121074. doi: 10.1016/j.carbpol.2023.121074

Yao, Hong, Flanagan, Bernadine M., Williams, Barbara A., Ismail, Munirah, Ersya, Astrada Dyna, Gidley, Michael J. and Mikkelsen, Deirdre (2023). Enzymatic arabinose depletion of wheat arabinoxylan regulates in vitro fermentation profiles and potential microbial degraders. Food Hydrocolloids, 142 108743, 1-10. doi: 10.1016/j.foodhyd.2023.108743

Visnupriyan, Ramanah, Flanagan, Bernadine, Harper, Karen and Cozzolino, Daniel (2023). Using mid infrared spectroscopy combined with chemometrics to determine digested starch and maltose concentration during in‐vitro digestion of starches. International Journal of Food Science and Technology, 58 (9), 4675-4682. doi: 10.1111/ijfs.16573

Yao, Hong, Williams, Barbara A., Mikkelsen, Deirdre, Flanagan, Bernadine M. and Gidley, Michael J. (2023). Composition and functional profiles of human faecal microbiota fermenting plant-based food particles are related to water-holding capacity more than particle size. Food Hydrocolloids, 141 108714, 1-11. doi: 10.1016/j.foodhyd.2023.108714

Yao, Hong, Flanagan, Bernadine M., Williams, Barbara A., Mikkelsen, Deirdre and Gidley, Michael J. (2023). Lactate and buyrate proportions, methanogen growth and gas production during in vitro dietary fibre fermentation all depend on fibre concentration. Food Hydrocolloids, 134 108061, 1-11. doi: 10.1016/j.foodhyd.2022.108061

Yao, Hong, Flanagan, Bernadine M., Williams, Barbara A., Mikkelsen, Deirdre and Gidley, Michael J. (2023). Particle size of dietary fibre has diverse effects on in vitro gut fermentation rate and end-products depending on food source. Food Hydrocolloids, 134 108096, 1-9. doi: 10.1016/j.foodhyd.2022.108096

Li, Haiteng, Dhital, Sushil, Flanagan, Bernadine M., Mata, Jitendra, Gilbert, Elliot P., Gilbert, Robert G. and Gidley, Michael J. (2022). Amorphous packing of amylose and elongated branches linked to the enzymatic resistance of high-amylose wheat starch granules. Carbohydrate Polymers, 295 119871, 119871. doi: 10.1016/j.carbpol.2022.119871

Yao, Hong, Williams, Barbara A., Flanagan, Bernadine M., Lisle, Allan, Mikkelsen, Deirdre and Gidley, Michael J. (2022). Soluble fibre concentration effects during in vitro fermentation: Higher concentration leads to increased butyrate proportion. Food Hydrocolloids, 130 107728, 107728. doi: 10.1016/j.foodhyd.2022.107728

Yao, Hong, Lu, Shiyi, Williams, Barbara A., Flanagan, Bernadine M., Gidley, Michael J. and Mikkelsen, Deirdre (2022). Absolute abundance values reveal microbial shifts and co-occurrence patterns during gut microbiota fermentation of dietary fibres in vitro. Food Hydrocolloids, 127 107422, 107422. doi: 10.1016/j.foodhyd.2021.107422

Widaningrum, , Flanagan, Bernadine M., Williams, Barbara A., Sonni, Francesca, Chen, Pengfei, Mikkelsen, Deirdre and Gidley, Michael J. (2022). In vitro fermentation profiles of undigested fractions from legume and nut particles are affected by particle cohesion and entrapped macronutrients. Food and Function, 13 (9), 5075-5088. doi: 10.1039/d2fo00250g

Nguyen, Thoa T. L., Flanagan, Bernadine M., Tao, Keyu, Ni, Dongdong, Gidley, Michael J., Fox, Glen P. and Gilbert, Robert G. (2022). Effect of processing on the solubility and molecular size of oat β-glucan and consequences for starch digestibility of oat-fortified noodles. Food Chemistry, 372 131291, 131291. doi: 10.1016/j.foodchem.2021.131291

Lu, Shiyi, Flanagan, Bernadine M., Mikkelsen, Deirdre, Williams, Barbara A. and Gidley, Michael J. (2022). In vitro fermentation of onion cell walls and model polysaccharides using human faecal inoculum: effects of molecular interactions and cell wall architecture. Food Hydrocolloids, 124 107257, 107257. doi: 10.1016/j.foodhyd.2021.107257

Junejo, Shahid Ahmed, Flanagan, Bernadine M., Zhang, Bin and Dhital, Sushil (2022). Starch structure and nutritional functionality – past revelations and future prospects. Carbohydrate Polymers, 277 118837, 118837. doi: 10.1016/j.carbpol.2021.118837

Chapagai, Madan Kumar, Fletcher, Brenton, Witt, Torsten, Dhital, Sushil, Flanagan, Bernadine M. and Gidley, Michael J. (2021). Multiple length scale structure-property relationships of wheat starch oxidized by sodium hypochlorite or hydrogen peroxide. Carbohydrate Polymer Technologies and Applications, 2 100147, 100147. doi: 10.1016/j.carpta.2021.100147

Lu, Shiyi, Williams, Barbara A., Flanagan, Bernadine M., Yao, Hong, Mikkelsen, Deirdre and Gidley, Michael J. (2021). Fermentation outcomes of wheat cell wall related polysaccharides are driven by substrate effects as well as initial faecal inoculum. Food Hydrocolloids, 120 106978, 106978. doi: 10.1016/j.foodhyd.2021.106978

Low, Dorrain Yanwen, Pluschke, Anton M., Flanagan, Bernadine, Sonni, Francesca, Grant, Lucas J., Williams, Barbara A. and Gidley, Michael J. (2021). Isolated pectin (apple) and fruit pulp (mango) impact gastric emptying, passage rate and short chain fatty acid (SCFA) production differently along the pig gastrointestinal tract. Food Hydrocolloids, 118 106723, 106723. doi: 10.1016/j.foodhyd.2021.106723

Lu, Shiyi, Mikkelsen, Deirdre, Flanagan, Bernadine M., Williams, Barbara A. and Gidley, Michael J. (2021). Interaction of cellulose and xyloglucan influences in vitro fermentation outcomes. Carbohydrate Polymers, 258 117698, 1-9. doi: 10.1016/j.carbpol.2021.117698

Bhattarai, Rewati R., Dhital, Sushil, Williams, Barbara A., Yang, Hong Jian, Mikkelsen, Deirdre, Flanagan, Bernadine M. and Gidley, Michael J. (2021). In vitro fermentation of legume cells and components: Effects of cell encapsulation and starch/protein interactions. Food Hydrocolloids, 113 106538. doi: 10.1016/j.foodhyd.2020.106538

Lu, Shiyi, Mikkelsen, Deirdre, Yao, Hong, Williams, Barbara A., Flanagan, Bernadine M. and Gidley, Michael J. (2021). Wheat cell walls and constituent polysaccharides induce similar microbiota profiles upon in vitro fermentation despite different short chain fatty acid end-product levels. Food and Function, 12 (3), 1135-1146. doi: 10.1039/d0fo02509g

Netzel, Gabriele, Mikkelsen, Deirdre, Flanagan, Bernadine M., Netzel, Michael E., Gidley, Michael J. and Williams, Barbara A. (2020). Metabolism of Black Carrot Polyphenols during In Vitro Fermentation is Not Affected by Cellulose or Cell Wall Association. Foods, 9 (12) 1911, 1911. doi: 10.3390/foods9121911

Lu, Shiyi, Flanagan, Bernadine M., Williams, Barbara A., Mikkelsen, Deirdre and Gidley, Michael J. (2020). Cell wall architecture as well as chemical composition determines fermentation of wheat cell walls by a faecal inoculum. Food Hydrocolloids, 107 105858, 105858. doi: 10.1016/j.foodhyd.2020.105858

Berglund, Jennie, Mikkelsen, Deirdre, Flanagan, Bernadine M., Dhital, Sushil, Gaunitz, Stefan, Henriksson, Gunnar, Lindström, Mikael E., Yakubov, Gleb E., Gidley, Michael J. and Vilaplana, Francisco (2020). Wood hemicelluloses exert distinct biomechanical contributions to cellulose fibrillar networks. Nature Communications, 11 (1) 4692, 4692. doi: 10.1038/s41467-020-18390-z

Feng, Guangli, Mikkelsen, Deirdre, Hoedt, Emily C., Williams, Barbara A., Flanagan, Bernadine M., Morrison, Mark and Gidley, Michael J. (2020). In vitro fermentation outcomes of arabinoxylan and galactoxyloglucan depend on fecal inoculum more than substrate chemistry. Food and Function, 11 (9), 7892-7904. doi: 10.1039/d0fo01103g

Li, Haiteng, Dhital, Sushil, Flanagan, Bernadine M., Mata, Jitendra, Gilbert, Elliot P. and Gidley, Michael J. (2020). High-amylose wheat and maize starches have distinctly different granule organization and annealing behaviour: a key role for chain mobility. Food Hydrocolloids, 105 105820, 105820. doi: 10.1016/j.foodhyd.2020.105820

Widaningrum, Flanagan, Bernadine M., Williams, Barbara A., Sonni, Francesca, Mikkelsen, Deirdre and Gidley, Michael J. (2020). Fruit and vegetable insoluble dietary fibre in vitro fermentation characteristics depend on cell wall type. Bioactive Carbohydrates and Dietary Fibre, 23 100223, 100223. doi: 10.1016/j.bcdf.2020.100223

Paulik, Sabina, Wen Yu, Wen, Flanagan, Bernadine, Gilbert, Robert G., Jekle, Mario and Becker, Thomas (2019). Characterizing the impact of starch and gluten-induced alterations on gelatinization behavior of physically modified model dough. Food Chemistry, 301 125276, 125276. doi: 10.1016/j.foodchem.2019.125276

Williams, Barbara A., Mikkelsen, Deirdre, Flanagan, Bernadine M. and Gidley, Michael J. (2019). “Dietary fibre”: moving beyond the “soluble/insoluble” classification for monogastric nutrition, with an emphasis on humans and pigs. Journal of Animal Science and Biotechnology, 10 (1) 45, 45. doi: 10.1186/s40104-019-0350-9

Feng, Guangli, Flanagan, Bernadine M., Mikkelsen, Deirdre, Williams, Barbara A. and Gidley, Michael J. (2019). Microbial enzymatic degradation of tamarind galactoxyloglucan and wheat arabinoxylan by a porcine faecal inoculum. Bioactive Carbohydrates and Dietary Fibre, 18 100183, 100183. doi: 10.1016/j.bcdf.2019.100183

Feng, Guangli, Flanagan, Bernadine M., Williams, Barbara A., Mikkelsen, Deirdre, Yu, Wenwen and Gidley, Michael J. (2018). Extracellular depolymerisation triggers fermentation of tamarind xyloglucan and wheat arabinoxylan by a porcine faecal inoculum. Carbohydrate Polymers, 201, 575-582. doi: 10.1016/j.carbpol.2018.08.089

Gartaula, Ghanendra, Dhital, Sushil, Netzel, Gabriele, Flanagan, Bernadine M., Yakubov, Gleb E., Beahan, Cherie T., Collins, Helen M., Burton, Rachel A., Bacic, Antony and Gidley, Michael J. (2018). Quantitative structural organisation model for wheat endosperm cell walls: Cellulose as an important constituent. Carbohydrate Polymers, 196, 199-208. doi: 10.1016/j.carbpol.2018.05.041

Warren, Frederick J., Fukuma, Naoki M., Mikkelsen, Deirdre, Flanagan, Bernadine M., Williams, Barbara A., Lisle, Allan T., Ó Cuív, Páraic, Morrison, Mark and Gidley, Michael J. (2018). Food starch structure impacts gut microbiome composition. mSphere, 3 (3) e00086-18. doi: 10.1128/mSphere.00086-18

Feng, Guangli, Flanagan, Bernadine M., Mikkelsen, Deirdre, Williams, Barbara A., Yu, Wenwen, Gilbert, Robert G and Gidley, Michael J (2018). Mechanisms of utilisation of arabinoxylans by a porcine faecal inoculum: competition and co-operation. Scientific Reports, 8 (1) 4546, 4546. doi: 10.1038/s41598-018-22818-4

Martinez-Sanz, Marta, Pettolino, Filomena, Flanagan, Bernadine, Gidley, Michael J. and Gilbert, Elliot P. (2017). Structure of cellulose microfibrils in mature cotton fibres. Carbohydrate Polymers, 175, 450-463. doi: 10.1016/j.carbpol.2017.07.090

Phan, Anh Dao T., Flanagan, Bernadine M., D'Arcy, Bruce R. and Gidley, Michael J. (2017). Binding selectivity of dietary polyphenols to different plant cell wall components: quantification and mechanism. Food Chemistry, 233, 216-227. doi: 10.1016/j.foodchem.2017.04.115

Martinez-Sanz, Marta, Mikkelsen, Deirdre, Flanagan, Bernadine M., Gidley, Michael J. and Gilbert, Elliot P. (2017). Multi-scale characterisation of deuterated cellulose composite hydrogels reveals evidence for different interaction mechanisms with arabinoxylan, mixed-linkage glucan and xyloglucan. Polymer, 124, 1-11. doi: 10.1016/j.polymer.2017.07.036

Patel, Hamung, Royall, Paul G., Gaisford, Simon, Williams, Gareth R. W, Edwards, Cathrina H., Warren Frederick J., Flanagan, Bernadine M., Ellis, Peter R. and Butterworth, Peter J. (2017). Structural and enzyme kinetic studies of retrograded starch: inhibition of α-amylase and consequences for intestinal digestion of starch. Carbohydrate Polymers, 164, 154-161. doi: 10.1016/j.carbpol.2017.01.040

Chen, Si-Qian, Mikkelsen, Deirdre, Lopez-Sanchez, Patricia, Wang, Dongjie, Martinez-Sanz, Marta, Gilbert, Elliot P., Flanagan, Bernadine M. and Gidley, Michael J. (2017). Characterisation of bacterial cellulose from diverse Komagataeibacter strains and their application to construct plant cell wall analogues. Cellulose, 24 (3), 1211-1226. doi: 10.1007/s10570-017-1203-3

Lopez-Sanchez, Patricia, Wang, Dongjie, Zhang, Zhiyan, Flanagan, Bernadine and Gidley, Michael J. (2016). Microstructure and mechanical properties of arabinoxylan and (1,3;1,4)-β-glucan gels produced by cryo-gelation. Carbohydrate Polymers, 151, 862-870. doi: 10.1016/j.carbpol.2016.06.038

Frost, Jovyn K. T., Flanagan, Bernadine M., Brummell, David A., O'Donoghue, Erin M., Mishra, Suman, Gidley, Michael J. and Monro, John A. (2016). Composition and structure of tuber cell walls affect: in vitro digestibility of potato (Solanum tuberosum L.). Food and Function, 7 (10), 4202-4212. doi: 10.1039/c6fo00895j

Martinez-Sanz, Marta, Mikkelsen, Deirdre, Flanagan, Bernadine, Gidley, Michael J. and Gilbert, Elliot P. (2016). Multi-scale model for the hierarchical architecture of native cellulose hydrogels. Carbohydrate Polymers, 147, 542-555. doi: 10.1016/j.carbpol.2016.03.098

Martinez-Sanz, Marta, Mikkelsen, Deirdre, Flanagan, Bernadine M., Rehm, Christine, de Campo, Liliana, Gidley, Michael J. and Gilbert, Elliot P. (2016). Investigation of the micro- and nano-scale architecture of cellulose hydrogels with plant cell wall polysaccharides: a combined USANS/SANS study. Polymer, 105, 449-460. doi: 10.1016/j.polymer.2016.07.015

Gunness, Purnima, Flanagan, Bernadine M., Mata, Jitendra P., Gilbert, Elliot P. and Gidley, Michael J. (2016). Molecular interactions of a model bile salt and porcine bile with (1,3:1,4)-β-glucans and arabinoxylans probed by 13C NMR and SAXS. Food Chemistry, 197 (Pt A), 676-685. doi: 10.1016/j.foodchem.2015.10.104

Warren, Frederick J., Gidley, Michael J. and Flanagan, Bernadine M. (2016). Infrared spectroscopy as a tool to characterise starch ordered structure - A joint FTIR-ATR, NMR, XRD and DSC study. Carbohydrate Polymers, 139, 35-42. doi: 10.1016/j.carbpol.2015.11.066

Zhang, Bin, Dhital, Sushil, Flanagan, Bernadine M., Luckman, Paul, Halley, Peter J. and Gidley, Michael J. (2015). Extrusion induced low-order starch matrices: enzymic hydrolysis and structure. Carbohydrate Polymers, 134 10197, 485-496. doi: 10.1016/j.carbpol.2015.07.095

Flanagan, Bernadine M., Gidley, Michael J. and Warren, Frederick J. (2015). Rapid quantification of starch molecular order through multivariate modelling of ¹³C CP/MAS NMR spectra. Chemical Communications, 51 (80), 14856-14858. doi: 10.1039/c5cc06144j

Low, Dorrain Y., Williams, Barbara A., D'Arcy, Bruce R., Flanagan, Bernadine M. and Gidley, Michael J. (2015). In vitro fermentation of chewed mango and banana: particle size, starch and vascular fibre effects. Food and Function, 6 (8), 2464-2474. doi: 10.1039/c5fo00363f

Xie, Fengwei, Flanagan, Bernadine M., Li, Ming, Truss, Rowan W., Halley, Peter J., Gidley, Michael J., McNally, Tony, Shamshina, Julia L. and Rogers, Robin D. (2015). Characteristics of starch-based films with different amylose contents plasticised by 1-ethyl-3-methylimidazolium acetate. Carbohydrate Polymers, 122, 160-168. doi: 10.1016/j.carbpol.2014.12.072

Dhital, Sushil, Dabit, Laura, Zhang, Bin, Flanagan, Bernadine and Shrestha, Ashok K. (2015). In vitro digestibility and physicochemical properties of milled rice. Food Chemistry, 172, 757-765. doi: 10.1016/j.foodchem.2014.09.138

Phan, Anh Dao T., Netzel, Gabriele, Wang, Dongjie, Flanagan, Bernadine M., D'Arcy, Bruce R. and Gidley, Michael J. (2015). Binding of dietary polyphenols to cellulose: structural and nutritional aspects. Food Chemistry, 171, 388-396. doi: 10.1016/j.foodchem.2014.08.118

Shrestha, Ashok K., Blazek, Jaroslav, Flanagan, Bernadine M., Dhital, Sushil, Larroque, Oscar, Morell, Matthew K., Gilbert, Elliot P. and Gidley, Michael J. (2015). Molecular, mesoscopic and microscopic structure evolution during amylase digestion of extruded maize and high amylose maize starches. Carbohydrate Polymers, 118, 224-234. doi: 10.1016/j.carbpol.2014.11.025

Mikkelsen, Deirdre, Flanagan, Bernadine M, Wilson, Sarah M, Bacic, Antony and Gidley, Michael J (2015). Interactions of Arabinoxylan and (1,3)(1,4)-β-Glucan with Cellulose Networks. Biomacromolecules, 16 (4), 1232-1239. doi: 10.1021/acs.biomac.5b00009

Lopez-Sanchez, Patricia, Cersosimo, Julie, Wang, Dongjie, Flanagan, Bernadine, Stokes, Jason R. and Gidley, Michael J. (2015). Poroelastic Mechanical Effects of Hemicelluloses on Cellulosic Hydrogels under Compression. PLoS One, 10 (3) e0122132, e0122132. doi: 10.1371/journal.pone.0122132

Xie, Fengwei, Flanagan, Bernadine M., Li, Ming, Sangwan, Parveen, Truss, Rowan W., Halley, Peter J., Strounina, Ekaterina V., Whittaker, Andrew K., Gidley, Michael J., Dean, Katherine M., Shamshina, Julia L., Rogers, Robin D. and McNally, Tony (2014). Characteristics of starch-based films plasticised by glycerol and by the ionic liquid 1-ethyl-3-methylimidazolium acetate: a comparative study. Carbohydrate Polymers, 111, 841-848. doi: 10.1016/j.carbpol.2014.05.058

Shelat, Kinnari J., Nicholson, Timothy, Flanagan, Barnadine M., Zhang, Dagong, Williams, Barbara A. and Gidley, Michael J. (2014). Rheology and microstructure characterisation of small intestinal digesta from pigs fed a red meat-containing Western-style diet. Food Hydrocolloids, 44, 300-308. doi: 10.1016/j.foodhyd.2014.09.036

Zhang, Bin, Wang, Kai, Hasjim, Jovin, Li, Enpeng, Flanagan, Bernadine M., Gidley, Michael J. and Dhital, Sushil (2014). Freeze-drying changes the structure and digestibility of B-polymorphic starches. Journal of Agricultural and Food Chemistry, 62 (7), 1482-1491. doi: 10.1021/jf405196m

Zhang, Bin, Dhital, Sushil, Flanagan, Bernadine M. and Gidley, Michael J. (2014). Mechanism for starch granule ghost formation deduced from structural and enzyme digestion properties. Journal of Agricultural and Food Chemistry, 62 (3), 760-771. doi: 10.1021/jf404697v

Higgins, Jody E., Kosar-Hashemi, Behjat, Li, Zhongyi, Howitt, Crispin A., Larroque, Oscar, Flanagan, Bernadine, Morell, Matthew K. and Rahman, Sadequr (2013). Characterization of starch phosphorylases in barley grains. Journal of the Science of Food and Agriculture, 93 (9), 2137-2145. doi: 10.1002/jsfa.6019

Hewavitharana, Amitha K., Tan, Zhi W., Shimada, Ryo, Shaw, Paul N. and Flanagan, Bernadine M. (2013). Between fruit variability of the bioactive compounds, β-carotene and mangiferin, in mango (Mangifera indica). Nutrition and Dietetics, 70 (2), 158-163. doi: 10.1111/1747-0080.12009

Gunness, Purnima, Flanagan, Bernadine M., Shelat, Kinnari, Gilbert, Robert G. and Gidley, Michael J. (2012). Kinetic analysis of bile salt passage across a dialysis membrane in the presence of cereal soluble dietary fibre polymers. Food Chemistry, 134 (4), 2007-2013. doi: 10.1016/j.foodchem.2012.03.131

Shrestha, Ashok K., Blazek, Jaroslav, Flanagan, Bernadine M., Dhital, Sushil, Larroque, Oscar, Morell, Matthew K., Gilbert, Elliot P. and Gidley, Michael J. (2012). Molecular, mesoscopic and microscopic structure evolution during amylase digestion of maize starch granules. Carbohydrate Polymers, 90 (1), 23-33. doi: 10.1016/j.carbpol.2012.04.041

Regina, Ahmed, Blazek, Jaroslav, Gilbert, Elliot, Flanagan, Bernadine M., Gidley, Michael J., Cavanagh, Colin, Ral, Jean-Philippe, Larroque, Oscar, Bird, Anthony R., Li, Zhongyi and Morell, Matthew K. (2012). Differential effects of genetically distinct mechanisms of elevating amylose on barley starch characteristics. Carbohydrate Polymers, 89 (3), 979-991. doi: 10.1016/j.carbpol.2012.04.054

Stoermer, Martin J., Flanagan, Bernadine, Beyer, Renée L., Madala, Praveen K. and Fairlie, David P. (2012). Structures of peptide agonists for human protease activated receptor 2. Bioorganic and Medicinal Chemistry Letters, 22 (2), 916-919. doi: 10.1016/j.bmcl.2011.12.029

Butardo, Vito M., Fitzgerald, Melissa A., Bird, Anthony R., Gidley, Michael J., Flanagan, Bernadine M., Larroque, Oscar, Resurreccion, Adoracion P., Laidlaw, Hunter K. C., Jobling, Stephen A., Morell, Matthew K. and Rahman, Sadequr (2011). Impact of down-regulation of starch branching enzyme IIb in rice by artificial microRNA- and hairpin RNA-mediated RNA silencing. Journal of Experimental Botany, 62 (14), 4927-4941. doi: 10.1093/jxb/err188

Dhital, Sushil, Shrestha, Ashok K., Flanagan, Bernadine M., Hasjim, Jovin and Gidley Michael J. (2011). Cryo-milling of starch granules leads to differential effects on molecular size and conformation. Carbohydrate Polymers, 84 (3), 1133-1140. doi: 10.1016/j.carbpol.2011.01.002

Wilkinson, Ashley, Flanagan, Bernadine M., Pierson, Jean-Thomas, Hewavitharana, Amitha, Dietzgen, Ralf G., Shaw, Paul N., Roberts-Thomson, Sarah J., Monteith, Gregory R. and Gidley, Mike (2011). Bioactivity of mango flesh and peel extracts on peroxisome proliferator-activated receptor gamma [PPARgamma] activation and MCF-7 cell proliferation: Fraction and fruit variability. Journal of Food Science, 76 (1), 11-18. doi: 10.1111/j.1750-3841.2010.01899.x

Gunness, Purnima, Flanagan, Bernadine M. and Gidley, Michael J. (2010). Molecular interactions between cereal soluble dietary fibre polymers and a model bile salt deduced from 13C NMR titration. Journal of Cereal Science, 52 (3), 444-449. doi: 10.1016/j.jcs.2010.07.009

Nguyen, Vu Tuan, Flanagan, Bernadine, Mikkelsen, Deirdre, Ramirez, Santiago, Rivas, Lucia, Gidley, Michael J. and Dykes, Gary A. (2010). Spontaneous mutation results in lower cellulose production by a Gluconacetobacter xylinus strain from Kombucha. Carbohydrate Polymers, 80 (2), 337-343. doi: 10.1016/j.carbpol.2009.11.019

Mikkelsen, D., Flanagan, B. M., Dykes, G. A. and Gidley, M. J. (2009). Influence of different carbon sources on bacterial cellulose production by Gluconacetobacter xylinus strain ATCC 53524. Journal of Applied Microbiology, 107 (2), 576-583. doi: 10.1111/j.1365-2672.2009.04226.x

Htoon, A., Shrestha, A. K., Flanagan, B. M., Lopez-Rubio, A., Bird, A. R., Gilbert, E. P. and Gidley, M. J. (2009). Effects of processing high amylose maize starches under controlled conditions on structural organisation and amylase digestibility. Carbohydrate Polymers, 75 (2), 236-245. doi: 10.1016/j.carbpol.2008.06.016

Nguyen, Vu Tuan, Flanagan, Bernadine M., Gidley, Michael J. and Dykes, Gary A. (2008). Characterization of cellulose production by a Gluconacetobacter xylinus strain from Kombucha. Current Microbiology, 57 (5), 449-453. doi: 10.1007/s00284-008-9228-3

Lopez-Rubio, Amparo, Flanagan, Bernadine M., Shrestha, Ashok K., Gidley, Michael J. and Gilbert, Elliot P. (2008). Molecular rearrangement of starch during in vitro digestion: Toward a better understanding of enzyme resistant starch formation in processed starches. Biomacromolecules, 9 (7), 1951-1958. doi: 10.1021/bm800213h

Lopez-Rubio, Amparo, Flanagan, Bernadine M., Gilbert, Elliot P. and Gidley, Michael J. (2008). A Novel Approach for Calculating Starch Cyrstallinity and Its Correlation with Double Helix Content: A Combined XRD and NRM Study. Biopolymers, 89 (9), 761-768. doi: 10.1002/bip.21005

Devlin, M. G., Pfeiffer, B., Flanagan, B. M., Beyer, R., Cocks, T. M and Fairlie, D. P. (2007). Hepta and octapeptide agonists of protease-activated receptor 2. Journal of Peptide Science, 13 (12), 856-861. doi: 10.1002/psc.912

Barry, Grant D., Suen, Jacky Y., Low, Heng Boon, Pfeiffer, Bernhard, Flanagan, Bernadine, Halili, Maria, Le, Giang T. and Fairlie, David P. (2007). A refined agonist pharmacophore for protease activated receptor 2. Bioorganic & Medicinal Chemistry Letters, 17 (20), 5552-5557. doi: 10.1016/j.bmcl.2007.08.026

Tan, Ihwa, Flanagan, Bernadine M., Halley, Peter J., Whittaker, Andrew K. and Gidley, Michael J. (2007). A method for estimating the nature and relative proportions of amorphous, single, and double-helical components in starch granules by 13C CP/MAS NMR. Biomacromolecules, 8 (3), 885-891. doi: 10.1021/bm060988a

Singh, Y, Hoang, HN, Flanagan, B and Fairlie, DP (2006). Self-condensation of a thiazole-peptide bearing a 21-membered loop into a library of giant macrocycles with multiple orthogonal loops. Organic Letters, 8 (6), 1053-1056. doi: 10.1021/ol052842e

Bernhardt, P. V., Flanagan, B. M., Riley, M. J. and Wood, B. J. (2002). An XPS study of an isomorphous trivalent lanthanoid series. Journal of Electron Spectroscopy And Related Phenomena, 124 (1), 73-77. doi: 10.1016/S0368-2048(02)00011-7

Flanagan, Bernadine M., Bernhardt, Paul V., Krause, Elmars R., Lüthi, Stefan R. and Riley, Mark J. (2002). A ligand-field analysis of the trensal (H3trensal = 2,2',2' '-tris(salicylideneimino)triethylamine) Ligand. An application of the angular overlap model to lanthanides. Inorganic Chemistry, 41 (20), 5024-5033. doi: 10.1021/ic011276q

Flanagan, B. M., Bernhardt, P. V., Krausz, E. R., Luthi, S. R. and Riley, M. J. (2001). Ligand-field analysis of an Er(III) complex with a heptadentate tripodal N4O3 ligand. Inorganic Chemistry, 40 (21), 5401-5407. doi: 10.1021/ic0103244

Bernhardt, P. V., Flanagan, B. M. and Riley, M. J. (2001). Completion of the isomorphous Ln(trensal) series. Australian Journal of Chemistry, 54 (4), 229-232. doi: 10.1071/CH01076

Bernhardt, P. V., Flanagan, B. and Riley, M. J. (2000). Isomorphous Ianthanide complexes of a Tripodal N4O3 Ligand. Australian Journal of Chemistry, 53 (3), 229-231. doi: 10.1071/CH99175

Bernhardt, P. V., Flanagan, B. M. and Riley, M. J. (1999). Metal-centred versus ligand-centred luminescence quenching of a macrocyclic copper(II) complex. Journal of The Chemical Society- Dalton Transactions (20), 3579-3584. doi: 10.1039/a902881a

Jacob, Sera Susan, Gidley, Mike, Smyth, Heather, Flanagan, Bernadine, Williams, Barbara and Hickey, Sarah (2023). Retracing ‘food’ steps- exploring Australia’s native legumes for novel food applications. 7th International Conference on Food Structures, Digestion and Health, Queenstown, New Zealand, 14-17 November 2023.

Visnupriyan, R., Harper, K., Flanagan, B. and Cozzolino, D. (2023). Infrared spectroscopy combined with machine learning techniques to monitor starch in vitro digestibility. 46th Annual Scientific Meeting of the Nutrition Society of Australia, Perth, WA, Australia, 29 November - 2 December. Cambridge, United Kingdom: Cambridge University Press. doi: 10.1017/S0029665123002057

Jacob, Sera Susan, Flanagan, Bernadine, Williams, Barbara, Hickey, Sarah, Gidley, Mike and Smyth, Heather (2022). Aroma as a tool to utilize the diversity of Australian wattleseeds. AIFST Conference, Melbourne, VIC Australia, 22-24 August 2022.

Jacob, Sera Susan, Smyth, Heather E., Flanagan, Bernadine M., Williams, Barbara A. and Gidley, Michael J. (2022). The Wattleseed Effect : Exploring Australia’s native legumes for novel food applications. 72nd Australasian Grain Science Conference, Canberra, ACT, Australia, 24-26 August 2022.

Jacob, Sera Susan, Smyth, Heather E., Flanagan, Bernadine M., Williams, Barbara A. and Gidley, Michael J. (2022). Inside out and upside down : Looking closer at Australian native wattleseeds for food applications. TropAg, Brisbane, QLD, Australia, 31 October-2 November 2022.

Moura Nadolny, Jaqueline, Best, Odette, Flanagan, Bernadine, Shewan, Heather, Smyth, Heather E. and Stokes, Jason (2021). Bunya nut as a healthy and versatile gluten-free source for flour production. 6th Food Structures, Digestion and Health Conference, Virtual, 16-19 November 2021.

Jacob, Sera Susan , Smyth, Heather E. , Flanagan, Bernadine M. , Williams, Barbara A. and Gidley, Michael J. (2021). Exploring the diversity in wattleseeds for food applications. Australasian Seed Science Conference , Virtual, 6-8 September 2021.

Jacob, Sera Susan, Smyth, Heather E., Flanagan, Bernadine M., Williams, Barbara A. and Gidley, Michael J. (2021). Understanding and utilizing variability within wattleseed species for better food applications. 6th Food Structure, Digestion and Health Conference , Virtual, 16-19 November 2021.

Berglund, Jennie, Mikkelsen, Deirdre, Flanagan, Bernadine, Dhital, Sushil, Henriksson, Gunnar, Lindstrom, Mikael, Yakubov, Gleb, Gidley, Michael and Vilaplana, Francisco (2019). Hydrogels of bacterial cellulose and wood hemicelluloses as a model of plant secondary cell walls. National Meeting of the American Chemical Society (ACS), Orlando, Florida, 31 March - 4 April 2019. Washington, DC, United States: American Chemical Society.

Gartaula, Ghanendra, Dhital, Sushil, Flanagan, Bernadine M. and Gidley, Mike (2017). An insight into the composition and properties of wheat endosperm cell walls. 2017 AACCI Annual Meeting (Cereals 17), San Diego CA, United States, 8-11 October 2017.

Netzel, Michael, Bobrich, Anna, Topp, Bruce, Russell, Dougal, Netzel, Gabi, Flanagan, Bernadine, Gidley, Michael and Fanning, Kent (2014). Biofortified produce – Queen Garnet a new high anthocyan plum. 38th Annual Scientific Meeting of the Nutrition Society of Australia, Hobart, TAS, Australia, 26-28 November 2014. Amsterdam, Netherlands: Elsevier. doi: 10.1016/j.jnim.2014.10.065

Netzel, G., Mikkelsen, D., Flanagan, B., Netzel, M., Gidley, M. J. and Williams, B. (2014). Modulation of in vitro fermentation by polyphenol-rich black carrot fractions. 29th International Horticultural Congress, Brisbane, QLD, Australia, 17-22 September 2014.

Netzel, G., Mikkelsen, D., Flanagan, B., Netzel, M., Gidley, M. J. and Williams, B. A. (2013). Black carrot polyphenols and their effect on plant cell wall fermentability. NSA NSNZ 2013 Joint Annual Scientific Meeting: 37th Annual Scientific Meeting of the Nutrition Society of Australia in conjunction with the Nutrition Society of New Zealand, Brisbane, QLD, Australia, 4-6 December, 2013. Perth, WA, Australia: Australasian Medical Journa.

Hoang, V. L. T., Pierson, J.-T., Curry, M. C., Flanagan, B., Dietzgen, R. G., Gidley, M. J., Roberts-Thomson, S. J., Shaw, P.N. and Monteith, G. R. (2012). Comparison of the bioactivities of peel and flesh extracts of three mango varieties. ComBio 2012, Adealide, Australia, 23-27 September 2012.

Gidley, M. J., Flanagan, B., Sharpe, K. and Sopade, P. A. (2011). Starch digestion in monogastrics: Mechanisms and opportunities. Recent Advances in Animal Nutrition - Australia (RAAN, 2011), Armidale, NSW, Australia, 13-15 July 2011. Armidale, NSW, Australia: University of New England.

Gunness, P., Flanagan, B. M. and Gidley, M. J. (2011). Mechanisms behind the cholesterol-lowering effect of cereal soluble dietary fibres. Australian Cereal Chemistry Conference (ACCC), Tweed Heads – Coolangatta, Australia, 4-9 September 2011.

Gunness, Purnima, Flanagan, Bernadine M., Mata, Jitendra T. and Gidley, Micahel J. (2011). Interactions between cereal soluble dietary fibres and bile salts. American Association of Cereal Chemists, Palm Springs, CA USA, 16-19 October 2011.

Gunness, P., Flanagan, B.M., Mata, J.P., Gilbert, E.P. and Gidley, M.J. (2010). Molecular interactions between bile salt micelles and soluble dietary fibres. The 2010 Annual Scientific Meeting of the Nutrition Society of Australia “Nutrition Sustainability”, Perth, WA, Australia, 30 November-3 December 2010.

Gunness, P., Flanagan, B.M. and Gidley, M.J. (2009). NMR study of molecular interactions between bile salts and cereal non-starch polysaccharides. Australian Cereal Chemistry Conference, Wagga Wagga, Australia, 2009.

Mikkelsen, D., Flanagan, B., Dykes, G. and Gidley, M. (2008). Bacterial cellulose composites: Models for primary plant cell walls of cereals and grasses. ASM 2008: Annual Scientific Meeting & Exhibition of the Australian Society for Microbiology, Melbourne, VIC, Australia, 6-10 July 2008. Melbourne, VIC, Australia: Australian Society for Microbiology.

Wilkinson, A. S., Lin, C. N., Flanagan, B., Dietzgen, R., Shaw, P. N., Monteith, G. R., Roberts-Thomson, S. J. and Gidley, M. J. (2008). Nutritional bioactives in tropical fruit. Experimental Biology 2008: Today's Research: Tomorrow's Health, San Diego, U.S., 5-6 April, 2008.

Gunness, P., Flanagan, B. M. and Gidley, M. J. (2008). Mechanisms behind the cholesterol-lowering effect of soluble dietary fibres. Nutrition Society of Australia 32nd Annual Scientific Meeting: Conference 2008, Stamford Grand Hotel, Adelaide, Australia, 30 November-3 December 2008. Adelaide, Australia: The Nutrition Society of Australia.

Shrestha, A. K., Htoon, A., Flanagan, B. M., Lopez-Rubio, S., Uthayakumaran, S., Chanvrier, H., Bird, A. R., Gilbert, E. P. and Gidley, M. D. (2007). Effect of processing high-amylose maize starches under controlled conditions on structural organization and amylase digestibility. 14th European Carbohydrate Symposium, Lubeck, Germany, 2-7 September, 2007.

Wilkinson, A. S., Lin, C. N., Flanagan, B. M., Dietzgen, R. G., Monteith, G. R., Shaw, P. N., Roberts-Thomson, S. J. and Gidley, M. J. (2007). Effects Of Mango Extracts and Components On Breast Cancer Cell Proliferation. 41st Annual Scientific Meeting of the Australasian Society of Clinical and Experimental Pharmacologists and Toxicologists and 10th Southeast Asian Western Pacific Regional Meeting of Pharmacologists, Adelaide, South Australia, 2-6 December 2007. Victoria, Australia: ASCEPT.

Flanagan, B. M. and Gidley, M. (2007). Applications of fourier transform infrared microspectroscopy in cereals. 57th Australian Cereal Chemistry Conference, Melbourne, Victoria, 5-10 August 2007. North Melbourne: Cereal Chemistry Division.

Flanagan, B. M., Tan, I., Halley, P. J., Whittaker, A. K. and Gidley, M. (2007). New insights into starch molecular conformation from solid state 13C NMR spectroscopy. 56th Australian Cereal Chemistry Conference, Freemantle, 10-14 September 2006. North Melbourne: Royal Australian Chemical Institute.

Wilkinson, A, Hewavitharana, A, Flanagan, B M, Dietzgen, R G, Monteith, G R, Shaw, P N, Roberts-Thomson, S J and Gidley, M (2006). Nutritional bioactives in tropical fruit. The 3rd Australian Health & Medical Research Congress, Melbourne Convention Centre, Melbourne, Australia, 26 November-1 December, 2006. Melbourne, Vic, Australia: National Health and Medical Research Council.

Gidley, M, Flanagan, B M, Shrestha, A K, Rubio, A.L., Gilbert,, Htoon,, Chanvrier,, Uthayakumaran,, Lillford, P.J., Xhou, X.K., Bird, A.R. and Topping, D.L. (2006). Digestibility of starches: effects of polymer conformation and food structure. Thirtieth Annual Scientific Meeting of the Nutr Soc of Aust, Sydney, 29 November - 2 December 2006. Melbourne: HEC Press.

Sutherland, A., Hewavitharana, A., Flanagan, B. M., Monteith, G. R., Shaw, N., Roberts-Thomson, S. J. and Gidley, M. (2005). Development and application of a liposome delivery method to enhance the bioavailability of antioxidants and evaluate cytotoxicity in colon and breast cancer in vitro models. 29th Annual Scientific Meeting of Nutrition Society of Australia, Melbourne, Vic, Australia, 30 November-3 December, 2005. Clayton, Vic., Australia: Blackwell Science Asia.

Flanagan, B., Bernhardt, P. V., Luethi, S. and Riley, M. J. (2001). Predicting Ianthanide spectroscopy and applications to energy up-conversion. Australiasian Conference on Optics, Lasers and Spectroscopy, Brisbane, 3-6 December, 2001. Brisbane: ACOLS 2001.

Bernhardt, P. V., Flanagan, B. and Riley, M. J. (1999). Rare earth dimers as candidates for upconversion. IC '99, Wellington, NZ, 31 January - 4 February 1999. Wellington, NZ: NZ Institute of Chemistry.

Jacob, Sera Susan, Gidley, Mike, Smyth, Heather, Flanagan, Bernadine, Williams, Barbara and Hickey, Sarah (2023). Breaking the wall of Food Sovereignty. Australian Academy of Science.

Jacob, Sera Susan, Adiamo, Oladipupo, Gidley, Mike, Smyth, Heather, Flanagan, Bernadine and Williams, Barbara (2023). Using wattleseeds for product development. Queensland Alliance for Agriculture and Food Innovation, The University of Queensland.

Flanagan, Bernadine M., Gidley, Michael J. and Warren, Frederick J. (2015). Rapid assessment of ordered molecular structure in a semi-crystalline polymer, starch, directly from solid state NMR spectra. The Royal Society of Chemistry. (Dataset) doi: 10.14264/uql.2017.269

Flanagan, Bernadine Mary (2002). The spectroscopy of trivalent lanthanoid ions in organic hosts. PhD Thesis, School of Molecular and Microbial Sciences, The University of Queensland. doi: 10.14264/105907

Dr Bernadine Flanagan

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